Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015845012.1_cds_XP_016509175.1_22129
CDS Infomation

[gene=LOC107826679] [db_xref=GeneID:107826679] [protein=protein HGV2-like] [protein_id=XP_016509175.1] [location=join(23109..23380,24355..24611,27002..27208,28354..28444,28598..28865,28941..29258)] [gbkey=CDS]
Sequence

ATGGCTGAGGAAGTAGCAAATTCAGAAACAACAAGCCCTACGGCGGAGCAGAACCAGAAC
TCGGTGAATGCCACCATCGAATCAGGGTTTCAGGGAGGTACAGAATCGACTTGCAACAAT
AATAATGCTGAGAGTTCTGCGGTTACTTCTGATGGTGACCGCGAAAAATCGCTGGAGTAC
GCCGATGAGCTAATGGAGAAAGGTGCTAAGGCCGATAAAGATGGAGATTATGGAGATGCC
GTTGAATGCTATAGTCGTGCTCTAGAAATCCGGGTTGCACATTTTGGTGAACTTGCTCCT
GAATGTATCAATGCATACTATAAATATGGGTGTGCTTTGCTGTGCAAAGCTCAGGATGAG
GCTGATCCTTTGGTTTCTGTGCCTAAAAAGGACAGCGAGTCTCAACAAGATTCTAATAGA
GATGGTTCTGTTAAGAGTACTGTTAGTTGTGAATCTTCTGTTGCTTCTATCTCAAGTACC
GGTGAACCAGGTGGAAGCTCAAATGGAAAGGAGAAAGAGGAAGATGATGCTGCAGAGGAA
AAAGACAATGAAGGAGATGAAGATGAAGAAGAAAGTGATGCTGAGGATGTGGCTGAAGGT
GATGAGGATGAAACTGACCTGGATTTAGCCTGGAAACTGTTAGATGTTGCAAGGGCAATT
GCTGAAAAGCACTCTGGTGACACAATGGAAAAAGTGGATGTATTATCAGCTTTGGCTGAG
GTAGCCTTGGAAAGAGAGGATCTTGAAACTTCCCTTAGTGATTACCTGAGGGCGTTATCC
ATTTTGGAACGCTTGGTTGAACCTGACAGTCGCCATATTGCTGAGCTCAACTTTAGGATA
TGTTTATGTCTGGAAATTGCTTCTAAGCCTCAGGAAGCCATACCATACTGCCAAAAGGCT
GTTTCGACTTGCAAGTCGCGGCTACAGAGGCTCACCGATGAAATAAAGCTTTTGTCAGAA
TCAACAGAAAGATCAGCTACTAATGTAGATCAGATTGCGAGACAATCGTCCAATGCATCA
CAGTCCAACTCTGTATCTGCTAAAGAAGCAGAGATTGAAACGCTCACAGGTCTATCTGCA
GAATTGGAGAAGAAGCTTGAAGATTTGCAGCAGTGCATGTCAAATCCATCATCTATCCTC
TCAGATATTCTGGGACTGGTTTCTGCGAAAGCAAGAAGTACGGAAAAAGCTGCGAGCTCT
TCACAGATGGGTGCTGCTACCAGTGGTAGTGGAGGTTTTGACTCTCCAACCGTTTCCACT
GCCCACACAAATGAGGCAGCTGGAGTGACTCATCTAGGTGTAGTGGGAAGAGGAGTCAAG
AGGGTGCTGCTAAACACAACTACAGAGTCTAGTCCAATGAAAAAGCCTGCATCTGAGCCG
CCATCAAATAATGGAGATGGCAGTGCCTCGTAA

Peptide Sequence

PEP ID

XP_016509175.1
PEP Infomation

PREDICTED: protein HGV2-like [Nicotiana tabacum]
Sequence

MAEEVANSETTSPTAEQNQNSVNATIESGFQGGTESTCNNNNAESSAVTSDGDREKSLEY
ADELMEKGAKADKDGDYGDAVECYSRALEIRVAHFGELAPECINAYYKYGCALLCKAQDE
ADPLVSVPKKDSESQQDSNRDGSVKSTVSCESSVASISSTGEPGGSSNGKEKEEDDAAEE
KDNEGDEDEEESDAEDVAEGDEDETDLDLAWKLLDVARAIAEKHSGDTMEKVDVLSALAE
VALEREDLETSLSDYLRALSILERLVEPDSRHIAELNFRICLCLEIASKPQEAIPYCQKA
VSTCKSRLQRLTDEIKLLSESTERSATNVDQIARQSSNASQSNSVSAKEAEIETLTGLSA
ELEKKLEDLQQCMSNPSSILSDILGLVSAKARSTEKAASSSQMGAATSGSGGFDSPTVST
AHTNEAAGVTHLGVVGRGVKRVLLNTTTESSPMKKPASEPPSNNGDGSAS

Transcript Sequence

Gene sequence data has not been registered.